About PolyASite

PolyASite was built by Youngbin Moon, Aleksei Mironov, Christina J. Herrmann, Ralf Schmidt, Alexander Kanitz, Panu Artimo, Andreas R. Gruber, Andreas J. Gruber, Manuel Belmadani, and Mihaela Zavolan in the Zavolan Lab.

Contact

For questions and suggestions please contact us at:

Code

v3.0: https://github.com/zavolanlab/SCINPAS

v2.0: https://github.com/zavolanlab/polyAsite_workflow

Citations

If you use PolyASite in your research, please cite the following publications:

v3.0: Moon, Y. et al. PolyASite v3.0: atlas of polyadenylation sites inferred from single-cell RNA-sequencing data. Manuscript in preparation. Link out

v2.0: Herrmann, C. J. et al. PolyASite 2.0: a consolidated atlas of polyadenylation sites from 3′ end sequencing. Nucleic Acids Res 48, D174–D179 (2020). Link out

v1.0: Gruber, A. J. et al. A comprehensive analysis of 3’ end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation. Genome Res. 26, 1145–1159 (2016). Link out