About PolyASite

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PolyASite was built by Christina J. Herrmann, Ralf Schmidt, Alexander Kanitz, Panu Artimo, Andreas R. Gruber, Andreas J. Gruber, Manuel Belmadani, and Mihaela Zavolan.

Code

The snakemake pipeline used to create the atlas can be found on: https://github.com/zavolanlab/polyAsite_workflow

Contact

If you have suggestions for improvements please let us know:

Citations

If you use PolyASite in your research, please cite the following publication:

Herrmann, C. J. et al. PolyASite 2.0: a consolidated atlas of polyadenylation sites from 3′ end sequencing. Nucleic Acids Res 48, D174–D179 (2020). Link out

Other publications:

Gruber, A. J. et al. A comprehensive analysis of 3’ end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation. Genome Res. 26, 1145–1159 (2016). Link out