Samples contributing to our atlases
Find samples we used for building our atlases.
Mus musculus: v3.0 (GRCm38.GENCODE_M25)
Poly(A) site catalogue constructed from 3' 10X scRNA-seq data of Tabula Muris Senis using SCINPAS workflow
Original databases with raw scRNA-seq data:
Homo sapiens: v3.0 (GRCh38.GENCODE_42)
Poly(A) site catalogue constructed from 3' 10X scRNA-seq data of Human Cell Atlas and NeMO repositories using SCINPAS workflow
Original databases with raw scRNA-seq data:
Caenorhabditis elegans: v3.0 (WBcel235.WormBase_WS293)
Poly(A) site catalogue constructed from 3' 10X scRNA-seq N2 and VC2010 worm embryonic cell data from Packer, Jonathan S., et al. 'A lineage-resolved molecular atlas of C. elegans embryogenesis at single-cell resolution.' Science 365.6459 (2019)
Original databases with raw scRNA-seq data: